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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs12655669 chr5:94009656 C/T 4.32E-5 407 14.78 17.63 9.8 KM Plot
LGG rs12676857 chr8:18266572 T/C 8.22E-5 403 14.92 16.3 11.82 KM Plot
LGG rs12684338 chr9:33911199 G/A 1.64E-5 405 15.35 16.38 6.13 KM Plot
LGG rs12762955 chr10:1078782 A/C 0.000129 394 15.73 14.97 10.57 KM Plot
LGG rs12763396 chr10:927357 C/A 2.55E-6 406 15.17 17.38 10.57 KM Plot
LGG rs12764024 chr10:922861 A/G 2.37E-6 399 15.02 17.75 12.17 KM Plot
LGG rs12765174 chr10:946974 T/C 3.68E-5 405 14.75 17.73 12.17 KM Plot
LGG rs12766381 chr10:909429 G/T 2.8E-6 404 15.13 17.73 10.57 KM Plot
LGG rs12768348 chr10:899224 T/G 1.12E-5 405 15.2 17.4 10.57 KM Plot
LGG rs12769002 chr10:927666 C/G 1.87E-5 407 12.17 15.72 15.25 KM Plot
LGG rs12769431 chr10:922633 T/C 3.91E-9 404 15.17 17.73 10.53 KM Plot
LGG rs12769873 chr10:936526 G/T 3.42E-5 406 15.02 17.73 12.17 KM Plot
LGG rs12774985 chr10:904245 C/T 1.18E-5 404 15.2 17.03 10.57 KM Plot
LGG rs12777800 chr10:1070361 G/A 4.45E-5 400 15.95 14.77 10.57 KM Plot
LGG rs12778271 chr10:932988 T/C 1.14E-5 402 15.2 16.38 12.17 KM Plot